Accessible files and folders

This page contains a list of folders and files that are accessible to the public.

JASPAR2028 curation results

Files for curation are organized by data batches. The batch names correspond to the Google sheet names.

There are two main files to look at in each batch directory:

Example file structure (relevant files in bold):

            
    curation_results/2028/
    └── <batch_name>/
        ├── motif_clustering/
        │   └── clustering_results/
        │       └── <batch_name>_<Taxon>_curation_table_<Taxon>/
        │           ├── clusters_D3_dynamic_tree.html
        │           ├── clusters_aligned_logos/
        │           ├── clusters_motifs/
        │           ├── clusters_plots/
        │           ├── clusters_tables/
        │           ├── clusters_trees/
        │           ├── discovered_motifs_clustering.tab
        │           └── js/
        └── summaries/
            └── <batch_name>_<Taxon>_summary.html
            
        

01_GSE299028-multiDAP

04_ChIP-seq-aspergillus

07_CT-japonica

08_DAP-seq-ZEA-CAU-MAU

02_ampDAP-ZEA

05_DAP-seq-microsporus

Batches